GA4GH Pedigree FHIR Implementation Guide
0.1.0 - ci-build

GA4GH Pedigree FHIR Implementation Guide - Local Development build (v0.1.0). See the Directory of published versions

: The trio's pedigree - JSON Representation

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{
  "resourceType" : "Composition",
  "id" : "TrioPedigree",
  "meta" : {
    "profile" : [
      "http://purl.org/ga4gh/pedigree-fhir-ig/StructureDefinition/Pedigree"
    ]
  },
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative</b></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource \"TrioPedigree\" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-Pedigree.html\">Pedigree</a></p></div><p><b>status</b>: final</p><p><b>type</b>: Family history section <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://browser.ihtsdotools.org/\">SNOMED CT</a>#422432008)</span></p><p><b>date</b>: 2021-02-10</p><p><b>author</b>: <a href=\"Organization-MelbourneGenomics.html\">Organization/MelbourneGenomics</a> \"Melbourne Genomics\"</p><p><b>title</b>: Pedigree</p></div>"
  },
  "status" : "final",
  "type" : {
    "coding" : [
      {
        "system" : "http://snomed.info/sct",
        "code" : "422432008"
      }
    ]
  },
  "subject" : {
    "reference" : "Patient/Proband"
  },
  "date" : "2021-02-10",
  "author" : [
    {
      "reference" : "Organization/MelbourneGenomics"
    }
  ],
  "title" : "Pedigree",
  "section" : [
    {
      "title" : "Proband",
      "code" : {
        "coding" : [
          {
            "system" : "http://purl.org/ga4gh/pedigree-fhir-ig/CodeSystem/SectionType",
            "code" : "proband"
          }
        ]
      },
      "entry" : [
        {
          "reference" : "Patient/Proband"
        }
      ]
    },
    {
      "title" : "Reason",
      "code" : {
        "coding" : [
          {
            "system" : "http://purl.org/ga4gh/pedigree-fhir-ig/CodeSystem/SectionType",
            "code" : "reason"
          }
        ]
      },
      "entry" : [
        {
          "reference" : "Condition/ProbandCondition"
        }
      ]
    },
    {
      "title" : "Individuals",
      "code" : {
        "coding" : [
          {
            "system" : "http://purl.org/ga4gh/pedigree-fhir-ig/CodeSystem/SectionType",
            "code" : "individuals"
          }
        ]
      },
      "entry" : [
        {
          "reference" : "Patient/Proband"
        },
        {
          "reference" : "Patient/Mother"
        },
        {
          "reference" : "Patient/Father"
        }
      ]
    },
    {
      "title" : "Relationships",
      "code" : {
        "coding" : [
          {
            "system" : "http://purl.org/ga4gh/pedigree-fhir-ig/CodeSystem/SectionType",
            "code" : "relationships"
          }
        ]
      },
      "entry" : [
        {
          "reference" : "FamilyMemberHistory/ProbandFatherRelationship"
        },
        {
          "reference" : "FamilyMemberHistory/ProbandMotherRelationship"
        }
      ]
    },
    {
      "title" : "Other",
      "code" : {
        "coding" : [
          {
            "system" : "http://purl.org/ga4gh/pedigree-fhir-ig/CodeSystem/SectionType",
            "code" : "other"
          }
        ]
      },
      "entry" : [
        {
          "reference" : "Condition/FatherFirstCondition"
        },
        {
          "reference" : "Condition/FatherSecondCondition"
        },
        {
          "reference" : "Organization/MelbourneGenomics"
        }
      ]
    }
  ]
}